Error installing RcppParallel 5.1.7 RcppParallel.so: undefined symbol:

[tlkoh0727]

Good Day!

Redhat Linux 7.9
R version 4.2.3
RcppParallel 5.1.7
gcc version 4.8

When installing RcppParallel using the command R CMD INSTALL RcppParallel_5.1.7.tar.gz it fails with below error:

• installing to library ‘/opt/opensource/R/R-4.2.3/lib64/R/library’
• installing source package ‘RcppParallel’ ...
  ** package ‘RcppParallel’ successfully unpacked and MD5 sums checked
  ** using staged installation
  ** preparing to configure package 'RcppParallel' ...
  *** configured file: 'R/tbb-autodetected.R.in' => 'R/tbb-autodetected.R'
  *** configured file: 'src/Makevars.in' => 'src/Makevars'
  *** configured file: 'src/install.libs.R.in' => 'src/install.libs.R'
  ** finished configure for package 'RcppParallel'
  ** libs
  (tbb) Building TBB using bundled sources ...
  make[1]: Entering directory /tmp/RtmpLGkjWv/R.INSTALL711a1df2519e/RcppParallel/src/tbb/src' OS: linux arch=intel64 compiler=gcc runtime=cc4.8.5_libc2.17_kernel3.10.0 tbb_build_prefix=linux_intel64_gcc_cc4.8.5_libc2.17_kernel3.10.0 work_dir=/tmp/RtmpLGkjWv/R.INSTALL711a1df2519e/RcppParallel/src/build/linux_intel64_gcc_cc4.8.5_libc2.17_kernel3.10.0_release make[1]: Leaving directory /tmp/RtmpLGkjWv/R.INSTALL711a1df2519e/RcppParallel/src/tbb/src'
  make[1]: Entering directory /tmp/RtmpLGkjWv/R.INSTALL711a1df2519e/RcppParallel/src/tbb/src' Created ../build/lib_release directory make -C "../build/lib_release" -r -f ../../build/Makefile.tbb cfg=release make[2]: Entering directory /tmp/RtmpLGkjWv/R.INSTALL711a1df2519e/RcppParallel/src/tbb/build/lib_release'
  ../../build/Makefile.tbb:28: CONFIG: cfg=release arch=intel64 compiler=gcc target=linux runtime=cc4.8.5_libc2.17_kernel3.10.0
  g++ -I../inst/include -o concurrent_hash_map.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fpic -D__TBB_BUILD=1 -Wall -Wextra -g -O2 -DTBB_NO_LEGACY=1 -I../../src -I../../src/rml/include -I../../include ../../src/tbb/concurrent_hash_map.cpp
  In file included from ../../include/tbb/concurrent_hash_map.h:26:0,
  from ../../src/tbb/concurrent_hash_map.cpp:17:
  ../../include/tbb/compat/iterator.h:19:11: error: expected nested-name-specifier before ‘iterator_category’
  using iterator_category = Category;
  ^
  ../../include/tbb/compat/iterator.h:19:11: error: using-declaration for non-member at class scope
  ../../include/tbb/compat/iterator.h:19:29: error: expected ‘;’ before ‘=’ token
  using iterator_category = Category;
  ^
  ../../include/tbb/compat/iterator.h:19:29: error: expected unqualified-id before ‘=’ token
  ../../include/tbb/compat/iterator.h:20:11: error: expected nested-name-specifier before ‘value_type’
  using value_type = T;
  ^
  ../../include/tbb/compat/iterator.h:20:11: error: using-declaration for non-member at class scope
  ../../include/tbb/compat/iterator.h:20:22: error: expected ‘;’ before ‘=’ token
  using value_type = T;
  ^
  ../../include/tbb/compat/iterator.h:20:22: error: expected unqualified-id before ‘=’ token
  ../../include/tbb/compat/iterator.h:21:11: error: expected nested-name-specifier before ‘difference_type’
  using difference_type = Distance;
  ^
  ../../include/tbb/compat/iterator.h:21:11: error: using-declaration for non-member at class scope
  ../../include/tbb/compat/iterator.h:21:27: error: expected ‘;’ before ‘=’ token
  using difference_type = Distance;
  ^
  ../../include/tbb/compat/iterator.h:21:27: error: expected unqualified-id before ‘=’ token
  ../../include/tbb/compat/iterator.h:22:11: error: expected nested-name-specifier before ‘pointer’
  using pointer = Pointer;
  ^
  ../../include/tbb/compat/iterator.h:22:11: error: using-declaration for non-member at class scope
  ../../include/tbb/compat/iterator.h:22:19: error: expected ‘;’ before ‘=’ token
  using pointer = Pointer;
  ^
  ../../include/tbb/compat/iterator.h:22:19: error: expected unqualified-id before ‘=’ token
  ../../include/tbb/compat/iterator.h:23:11: error: expected nested-name-specifier before ‘reference’
  using reference = Reference;
  ^
  ../../include/tbb/compat/iterator.h:23:11: error: using-declaration for non-member at class scope
  ../../include/tbb/compat/iterator.h:23:21: error: expected ‘;’ before ‘=’ token
  using reference = Reference;
  ^
  ../../include/tbb/compat/iterator.h:23:21: error: expected unqualified-id before ‘=’ token
  make[2]: *** [concurrent_hash_map.o] Error 1
  make[2]: Leaving directory /tmp/RtmpLGkjWv/R.INSTALL711a1df2519e/RcppParallel/src/tbb/build/lib_release' make[1]: *** [tbb_release] Error 2 make[1]: Leaving directory /tmp/RtmpLGkjWv/R.INSTALL711a1df2519e/RcppParallel/src/tbb/src'
  g++ -std=gnu++11 -I"/opt/opensource/R/R-4.2.3/lib64/R/include" -DNDEBUG -I../inst/include -I/usr/local/include -std=gnu++11 -DRCPP_PARALLEL_USE_TBB=1 -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -fpic -g -O2 -c init.cpp -o init.o
  g++ -std=gnu++11 -I"/opt/opensource/R/R-4.2.3/lib64/R/include" -DNDEBUG -I../inst/include -I/usr/local/include -std=gnu++11 -DRCPP_PARALLEL_USE_TBB=1 -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -fpic -g -O2 -c options.cpp -o options.o
  g++ -std=gnu++11 -shared -L/opt/opensource/R/R-4.2.3/lib64/R/lib -L/usr/local/lib64 -o RcppParallel.so init.o options.o -L/opt/opensource/R/R-4.2.3/lib64/R/lib -lR
  installing via 'install.libs.R' to /opt/opensource/R/R-4.2.3/lib64/R/library/00LOCK-RcppParallel/00new/RcppParallel
  ** R
  ** inst
  ** byte-compile and prepare package for lazy loading
  ** help
  *** installing help indices
  ** building package indices
  ** testing if installed package can be loaded from temporary location
  Error: package or namespace load failed for ‘RcppParallel’:
  .onLoad failed in loadNamespace() for 'RcppParallel', details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object '/opt/opensource/R/R-4.2.3/lib64/R/library/00LOCK-RcppParallel/00new/RcppParallel/libs/RcppParallel.so':
  /opt/opensource/R/R-4.2.3/lib64/R/library/00LOCK-RcppParallel/00new/RcppParallel/libs/RcppParallel.so: undefined symbol: _ZN3tbb10interface58internal9task_base7destroyERNS_4taskE
  Error: loading failed
  Execution halted
  ERROR: loading failed
• removing ‘/opt/opensource/R/R-4.2.3/lib64/R/library/RcppParallel’

As noticed as well, the folder path and file 00LOCK-RcppParallel/00new/RcppParallel/libs/RcppParallel.so was not created
Appreciate any suggestions.

Thanks

[eddelbuettel]

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